《中国康复理论与实践》 ›› 2004, Vol. 10 ›› Issue (03): 152-157.

• 基础研究 • 上一篇    下一篇

PRKCG基因多态性扫描及其与帕金森病的相关性研究

杜万良1,2; 王荫华1; 陈彪2   

  1. 1.北京大学第一医院神经内科 北京市 100034;2.北京老年病研究所 北京市 100053
  • 收稿日期:2004-02-12 出版日期:2004-03-25 发布日期:2004-03-25

Screening of SNPs in the coding region of PRKCG via DHPLC and study of their association with Parkinson's disease

DU Wan-liang,WANG Yin-hua,CHEN Biao   

  1. Department of Neurology, First Hospital, Peking University, Beijing 100034,China
  • Received:2004-02-12 Published:2004-03-25 Online:2004-03-25

摘要: 目的寻找蛋白激酶Cγ(PKCγ)基因PRKCG的变异位点,探讨其与帕金森病(PD)发病的关系。方法取PD患者和正常对照人群的DNA,用高压液相色谱分析(DHPLC)做PRKCG全编码区18个外显子和外显子-内含子交界区扫描,比较变异位点上早发PD、晚发PD和正常对照的基因型频率、基因频率。结果共扫描到7个单核苷酸多态性(SNP)位点和1个重复序列。其中有5个多态性位点属首次发现。8个位点中有3个变异位点(IVS11+26G,IVS13+76C,1497C)完全连锁。相关性分析显示这些位点与散发性PD之间没有统计学相关性。结论PRKCG基因可能不是散发PD的易感基因。

关键词: PRKCG基因, 帕金森病, 单核苷酸多态性, 变性高压液相色谱分析, 病例-对照研究

Abstract: ObjectiveTo screen the variations of the human protein kinase Cγ gene (PRKCG) and study their association with Parkinson's disease(PD).MethodsDNA was extracted from blood of patients with PD and matched normal controls. All 18 exons including the exon-intron junctions were amplified in 17 different PCR fragments, which were analyzed for the presence of variations by DHPLC. The PCR products with a heteroduplex peak were sequenced. Significance was evaluated from 2×2 contingency tables byX2 test on the basis of the total number of alleles at each locus. Case-control association analysis was performed between candidate polymorphisms and PD. ResultsIn the 50 early-onset PD(EOPD) patients and 50 controls, there was no missense mutation, insertions or deletions in coding regions of the PRKCG. But 2 different single nucleotide polymorphism(SNPs) in exons, 5 different SNPs and 1 tetranucleotide repeat in introns were identified. Five of them [IVS3+96G>T, IVS11+26T>G, IVS15-41T>C, IVS16-59G>A, IVS16-42(TCTG)1-2] were described here for the first time. Three of them (IVS11+26T>G, IVS13+76T>C,1497T>C),in complete linkage,constituted a haplotype block. In the preliminary association analysis, the frequency of IVS13+76C, IVS11+26G and 1497C allele on this haplotype block was significantly higher in EOPD patients than the controls (24% vs 9%)(X2=8.165,P=0.004,OR=3.193, 95%CI:1.400-7.282). But in a larger sample of 156 EOPD patients, 153 late-onset PD(LOPD) patients and 195 normal controls, there was no significant difference between the three groups (12.8%,13.7% ,14.6%)(X2=0.471,P=0.790). ConclusionThe PRKCG gene might not be a risk factor for sporadic PD.

Key words: PRKCG, Parkinson's disease, single nucleotide polymorphism, DHPLC, case-control